#include <iso.h>

Collaboration diagram for t_iso_sp:

Public Member Functions
TransitionProxy	trans (const long ipHi, const long ipLo)

void	Reset ()

Data Fields
multi_arr< long, 2 >	ipTrans

multi_arr< extra_tr, 2 >	ex

multi_arr< double, 2 >	CascadeProb

multi_arr< double, 2 >	BranchRatio

vector< freeBound >	fb

qList	st

TransitionList *	tr

multi_arr< long, 3 >	QuantumNumbers2Index

multi_arr< long, 3 >	IndexIfAllResolved

double	xIonSimple

bool	lgPrtDepartCoef

bool	lgPrtLevelPops

bool	lgLevelsLowered

bool	lgLevelsEverLowered

bool	lgMustReeval

bool	lgPopsRescaled

long int	nCollapsed_max

long int	nCollapsed_local

long int	numLevels_max

long int	numLevels_local

long int	numLevels_malloc

long int	n_HighestResolved_max

long int	n_HighestResolved_local

realnum	CaseBCheck

double	RadRec_caseB

double	RadRec_effec

double	RecomCollisFrac

bool	lgPopLTE_OK

double	FreeBnd_net_Cool_Rate

double	coll_ion

double	cRest_cool

double	xLineTotCool

double	dLTot

double	RadRecCool

double	cBal_cool

double	cLyrest_cool

double	cLya_cool

double	RecomInducCool_Rate

char	chTypeAtomUsed [10]

bool	lgErrGenDone

double	qTot2S

multi_arr< realnum, 3 >	CachedAs

vector< two_photon >	TwoNu

vector< double >	HighestLevelOpacStack

bool	lgPrtMatrix

Detailed Description

Definition at line 470 of file iso.h.

Member Function Documentation

void t_iso_sp::Reset ( )

Definition at line 113 of file iso.cpp.

References CaseBCheck, chTypeAtomUsed, fb, lgErrGenDone, lgLevelsEverLowered, lgLevelsLowered, lgMustReeval, lgPopsRescaled, RadRec_caseB, and TwoNu.

Referenced by InitSimPostparse(), and IterRestart().

TransitionProxy t_iso_sp::trans	(	const long	ipHi,
		const long	ipLo
	)

inline

Definition at line 473 of file iso.h.

References ipTrans, and tr.

Referenced by cdTemp(), collectSkipTrans(), ContCreatePointers(), ConvIterCheck(), dBase_solve(), DoFSMixing(), eden_sum(), ForbiddenAuls(), GetStandardHeLines(), GrainTemperature(), HeCSInterp(), helike_transprob(), HydroCSInterp(), diatomics::init(), ion_photo(), IonHydro(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_continuum_lower(), iso_cool(), iso_create(), iso_get_collision_strength(), iso_level(), iso_multiplet_opacities_one(), iso_renorm(), iso_setOpacity(), iso_setRedisFun(), iso_solve(), iso_suprathermal(), IterStart(), lines_helium(), lines_hydro(), lines_iron_Ka(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtHydroTrace1(), PrtLinePres(), randomize_inten(), RT_diffuse(), RT_line_all_escape(), RT_line_driving(), RT_OTS(), RT_stark(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), Save_Line_RT(), SaveDo(), SaveSpecial(), setXtraRatesCa2(), and setXtraRatesO1().

Field Documentation

multi_arr<double,2> t_iso_sp::BranchRatio

Definition at line 480 of file iso.h.

Referenced by iso_allocate(), iso_cascade(), iso_radiative_recomb_effective(), and SanityCheckBegin().

multi_arr<realnum,3> t_iso_sp::CachedAs

Definition at line 596 of file iso.h.

Referenced by helike_transprob_collapsed_to_resolved(), hydro_transprob_collapsed_to_resolved(), iso_allocate(), iso_collapsed_Aul_update(), iso_get_collision_strength_collapsed_to_collapsed_fast(), and iso_get_collision_strength_collapsed_to_resolved().

multi_arr<double,2> t_iso_sp::CascadeProb

Definition at line 479 of file iso.h.

Referenced by iso_allocate(), iso_cascade(), and iso_radiative_recomb_effective().

realnum t_iso_sp::CaseBCheck

difference between actual case b photons in rtdiffuse, and correct case b

Definition at line 541 of file iso.h.

Referenced by Reset(), and RT_iso_integrate_RRC().

double t_iso_sp::cBal_cool

net cooling due to collisional excit of balmer lines

Definition at line 575 of file iso.h.

Referenced by iso_cool().

char t_iso_sp::chTypeAtomUsed[10]

flag to set which type of solution was used for level pops, "zero" or "popul"

Definition at line 587 of file iso.h.

Referenced by iso_level(), and Reset().

double t_iso_sp::cLya_cool

net cooling due to collisional excit of Lya

Definition at line 581 of file iso.h.

Referenced by iso_cool().

double t_iso_sp::cLyrest_cool

net cooling due to collisional excit of higher lyman lines

Definition at line 578 of file iso.h.

Referenced by iso_cool().

double t_iso_sp::coll_ion

net cooling due to collisional ionization

Definition at line 560 of file iso.h.

Referenced by iso_cool().

double t_iso_sp::cRest_cool

net cooling due to collisional excit of higher lines

Definition at line 563 of file iso.h.

Referenced by iso_cool().

double t_iso_sp::dLTot

deriv of net cooling due to total collisional excit of lines

Definition at line 569 of file iso.h.

Referenced by HeatSum(), and iso_cool().

multi_arr<extra_tr,2> t_iso_sp::ex

Definition at line 478 of file iso.h.

Referenced by iso_allocate(), iso_cascade(), iso_create(), iso_error_generation(), iso_ionize_recombine(), iso_level(), iso_put_error(), randomize_inten(), and RT_stark().

vector<freeBound> t_iso_sp::fb

Definition at line 481 of file iso.h.

Referenced by Badnell_rec_init(), ContCreatePointers(), ContRate(), ContSetIntensity(), CoolHyperfine(), cross_section(), DoSatelliteLines(), FillExtraLymanLine(), GetHelikeCollisionStrength(), GrainRateDr(), HeCSInterp(), HydroCSInterp(), HydroRecCool(), ion_photo(), IonHydro(), iso_allocate(), iso_cascade(), iso_collide(), iso_collisional_ionization(), iso_cool(), iso_create(), iso_departure_coefficients(), iso_dielec_recomb_rate(), iso_get_collision_strength(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_discrete(), iso_rad_rec_cooling_extra(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_radrecomb_from_cross_section(), iso_satellite_update(), iso_set_ion_rates(), iso_solve(), iso_zero(), IterRestart(), IterStart(), lines_continuum(), mole_h_reactions(), OpacityAddTotal(), OpacityCreateAll(), PrintRates(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHeader(), PrtHydroTrace1a(), PrtZone(), radius_increment(), Reset(), RT_continuum(), RT_iso_integrate_RRC(), RT_OTS(), RT_tau_init(), SanityCheckBegin(), save_opacity(), and SaveDo().

double t_iso_sp::FreeBnd_net_Cool_Rate

net free bound cooling for this element

Definition at line 557 of file iso.h.

Referenced by iso_cool().

vector<double> t_iso_sp::HighestLevelOpacStack

Definition at line 600 of file iso.h.

Referenced by iso_radiative_recomb(), and OpacityCreateAll().

multi_arr<long,3> t_iso_sp::IndexIfAllResolved

Definition at line 492 of file iso.h.

Referenced by he_1trans(), helike_transprob_collapsed_to_resolved(), hydro_transprob_collapsed_to_resolved(), iso_allocate(), iso_assign_quantum_numbers(), iso_get_collision_strength_collapsed_to_collapsed_fast(), and iso_get_collision_strength_collapsed_to_resolved().

multi_arr<long,2> t_iso_sp::ipTrans

Definition at line 477 of file iso.h.

Referenced by iso_allocate(), and trans().

bool t_iso_sp::lgErrGenDone

this is flag saying that random gaussians have already been set...they should only be done once per model, and this must be reset to false at the beginning of each model.

Definition at line 591 of file iso.h.

Referenced by iso_error_generation(), iso_update_rates(), and Reset().

bool t_iso_sp::lgLevelsEverLowered

This variable is set to true if the continuum was lowered at any point in the calculation. Necessary because some models will lowered continuum at intermediate points but not last zone.

Definition at line 509 of file iso.h.

Referenced by iso_continuum_lower(), and Reset().

bool t_iso_sp::lgLevelsLowered

true if the number of levels is currently lowered

Definition at line 505 of file iso.h.

Referenced by iso_collisional_ionization(), iso_continuum_lower(), iso_radiative_recomb(), and Reset().

bool t_iso_sp::lgMustReeval

Definition at line 512 of file iso.h.

Referenced by iso_continuum_lower(), iso_photo(), iso_radiative_recomb(), and Reset().

bool t_iso_sp::lgPopLTE_OK

true is all lte populations positive for Hydrogenic atoms

Definition at line 554 of file iso.h.

Referenced by iso_collide().

bool t_iso_sp::lgPopsRescaled

Definition at line 515 of file iso.h.

Referenced by iso_level(), and Reset().

bool t_iso_sp::lgPrtDepartCoef

option to print departure coefficients

Definition at line 499 of file iso.h.

Referenced by ParsePrint().

bool t_iso_sp::lgPrtLevelPops

option to print level populations

Definition at line 502 of file iso.h.

Referenced by ParsePrint().

bool t_iso_sp::lgPrtMatrix

print Matrix input to solver

Definition at line 603 of file iso.h.

Referenced by iso_allocate().

long int t_iso_sp::n_HighestResolved_local

the local (pressure lowered) version of the above

Definition at line 538 of file iso.h.

Referenced by InitSimPostparse(), iso_continuum_lower(), iso_level(), iso_radiative_recomb(), iso_update_num_levels(), PrtAllTau(), and PrtComment().

long int t_iso_sp::n_HighestResolved_max

principal quantum number n of the highest resolved level

Definition at line 536 of file iso.h.

Referenced by Badnell_rec_init(), helike_transprob_collapsed_to_resolved(), hydro_transprob_collapsed_to_resolved(), InitCoreload(), InitSimPostparse(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_continuum_lower(), iso_get_collision_strength(), iso_get_collision_strength_collapsed_to_collapsed_fast(), iso_get_collision_strength_collapsed_to_resolved(), iso_multiplet_opacities_one(), iso_update_num_levels(), lgCheckMonitors(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), ParseCompile(), ParseDatabaseISO(), RT_tau_init(), and SanityCheckBegin().

long int t_iso_sp::nCollapsed_local

Definition at line 519 of file iso.h.

Referenced by InitSimPostparse(), iso_continuum_lower(), iso_prt_pops(), iso_radiative_recomb(), iso_update_num_levels(), lines(), PresTotCurrent(), PrtComment(), PrtLinePres(), and SaveDo().

long int t_iso_sp::nCollapsed_max

the number of collapsed levels, these lie on top of resolved levels

Definition at line 518 of file iso.h.

Referenced by Badnell_rec_init(), GetStandardHeLines(), HeCollidSetup(), helike_transprob_collapsed_to_resolved(), hydro_transprob_collapsed_to_resolved(), InitCoreload(), InitSimPostparse(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_continuum_lower(), iso_get_collision_strength(), iso_multiplet_opacities_one(), iso_radiative_recomb(), iso_recomb_setup(), iso_solve(), iso_update_num_levels(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), ParseCompile(), ParseDatabaseISO(), PrtAllTau(), and SanityCheckBegin().

long int t_iso_sp::numLevels_local

total number of levels with continuum pressure lowering included this varies from zone to zone, and from model to model, but cannot exceed numLevels_max

Definition at line 529 of file iso.h.

Referenced by DynaIonize(), DynaNewStep(), HydroLevel(), InitSimPostparse(), iso_allocate(), iso_collide(), iso_continuum_lower(), iso_cool(), iso_departure_coefficients(), iso_ionize_recombine(), iso_level(), iso_photo(), iso_prt_pops(), iso_rad_rec_cooling_approx(), iso_rad_rec_cooling_discrete(), iso_rad_rec_cooling_extra(), iso_radiative_recomb(), iso_radiative_recomb_effective(), iso_renorm(), iso_set_ion_rates(), iso_update_num_levels(), lgCheckMonitors(), lines(), OpacityAdd1Element(), OpacityAddTotal(), PresTotCurrent(), PrintRates(), PrtAllTau(), PrtComment(), PrtFinal(), PrtHydroTrace1(), PrtLinePres(), prtmet(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_driving(), RT_OTS(), RT_stark(), RT_tau_inc(), RT_tau_init(), SaveDo(), SaveLineStuff(), and state_get_put().

long int t_iso_sp::numLevels_malloc

number of levels malloc'd in the core load, can't go over that later in later sims can lower number of levels but not raise them

Definition at line 533 of file iso.h.

Referenced by InitCoreload(), and iso_allocate().

long int t_iso_sp::numLevels_max

total number of collapsed and resolve levels, numLevels_max is derived from total resolved and collapsed levels it is the maximum number of levels ever to be used in this core load.

Definition at line 524 of file iso.h.

Referenced by Badnell_rec_init(), collectSkipTrans(), ContCreatePointers(), ContSetIntensity(), DoSatelliteLines(), DynaCreateArrays(), DynaSaveLast(), DynaStartZone(), HeCollidSetup(), InitCoreload(), InitCoreloadPostparse(), InitSimPostparse(), ion_trim(), ion_trim2(), iso_allocate(), iso_assign_quantum_numbers(), iso_cascade(), iso_collapsed_Aul_update(), iso_collapsed_lifetimes_update(), iso_collide(), iso_collisional_ionization(), iso_continuum_lower(), iso_cool(), iso_create(), iso_departure_coefficients(), iso_error_generation(), iso_get_collision_strength(), iso_ionize_recombine(), iso_level(), iso_multiplet_opacities_one(), iso_photo(), iso_put_recomb_error(), iso_radiative_recomb(), iso_recomb_setup(), iso_satellite(), iso_satellite_update(), iso_solve(), iso_suprathermal(), iso_update_num_levels(), iso_zero(), IterRestart(), IterStart(), lines_continuum(), lines_helium(), lines_hydro(), Opacity_iso_photo_cs(), OpacityCreateAll(), ParseElement(), PrtAllTau(), radius_increment(), renorm_solution(), RT_line_all_escape(), RT_stark(), RT_tau_init(), RT_tau_reset(), SanityCheckBegin(), SaveLineData(), and state_get_put().

double t_iso_sp::qTot2S

the effective collisional rate from 2S, for h-like and he-like sequences

Definition at line 594 of file iso.h.

Referenced by iso_level().

multi_arr<long,3> t_iso_sp::QuantumNumbers2Index

Find index given quantum numbers Since separate j levels within a triplet term are only resolved in the case of 2tripP, allocating memory for a j dimension is unwarranted. Instead iso.QuantumNumbers2Index[ipISO][nelem][2][1][1] will point to 2^3P2, with 2^3P0 and 2^3P1 easily accessed by subtracting 2 and 1 respectively from the returned index.

Definition at line 490 of file iso.h.

Referenced by Badnell_rec_init(), chkCaHeps(), collectSkipTrans(), cross_section(), DoFSMixing(), he_1trans(), He_cross_section(), HeCSTableInterp(), helike_quantum_defect(), HlikeCSInterp(), iso_allocate(), iso_assign_quantum_numbers(), iso_collapsed_Aul_update(), iso_level(), iso_prt_pops(), iso_put_recomb_error(), lines_helium(), lines_hydro(), PrtAllTau(), PrtHeader(), RT_tau_init(), and SanityCheckBegin().