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Data Structures | |
struct | t_opac |
Functions | |
void | OpacityCreateAll (void) |
void | OpacityAdd1Subshell (long int ipOpac, long int ipLowLim, long int ipUpLim, realnum abundance, char chStat) |
void | OpacityAddTotal (void) |
void | OpacityAdd1Element (long int ipZ) |
void | OpacityZero (void) |
void | OpacityZeroOld (void) |
void | OpacityAdd1SubshellInduc (long int ipOpac, long int low, long int ihi, double a, double b, char chStat) |
Variables | |
bool | lgOpacMalloced |
t_opac | opac |
routines dealing with creation and evaluration of opacities
Definition in file opacity.h.
void OpacityAdd1Element | ( | long int | ipZ | ) |
OpacityAdd1Element enter total photo cross section for all subshells of a single element into opacity array
ipZ | is 0 for H, 1 for He, etc |
Definition at line 12 of file opacity_add1element.cpp.
References ASSERT, DEBUG_ENTRY, dense, t_iso_sp::fb, Heavy, t_opac::ipElement, iso_sp, LIMELM, MAX2, t_rfield::nflux, NISO, t_Heavy::nsShells, t_iso_sp::numLevels_local, opac, OpacityAdd1Subshell(), OpacityAdd1SubshellInduc(), rfield, t_iso_sp::st, and t_dense::xIonDense.
Referenced by OpacityAddTotal(), SanityCheckBegin(), and save_opacity().
void OpacityAdd1Subshell | ( | long int | ipOpac, | |
long int | ipLowLim, | |||
long int | ipUpLim, | |||
realnum | abundance, | |||
char | chStat | |||
) |
OpacityAdd1Subshell add opacity due to single species to main opacity array
ipOpac | ipOpac is opacity index within opac opacity offset for this species | |
ipLowLim | lower freq limit to opacity range on energy mesh | |
ipUpLim | upper limit to opacity range on energy mesh | |
abundance | abundance, we bail if zero | |
chStat | either static 's' or volitile 'v' |
Definition at line 10 of file opacity_add1subshell.cpp.
References ASSERT, DEBUG_ENTRY, t_opac::lgRedoStatic, MIN2, t_rfield::nflux, opac, t_opac::opacity_abs, t_opac::OpacStack, t_opac::OpacStatic, and rfield.
Referenced by OpacityAdd1Element(), and OpacityAddTotal().
void OpacityAdd1SubshellInduc | ( | long int | ipOpac, | |
long int | low, | |||
long int | ihi, | |||
double | a, | |||
double | b, | |||
char | chStat | |||
) |
OpacityAdd1SubshellInduc add opacity of individual species, including stimulated emission
ipOpac | pointer to opacity offset with stack | |
low | low energy limit to opacity bound | |
ihi | high-energy limit to opacity bound | |
a | the abundance of the species in this level | |
b | the departure coefficient | |
chStat | either 's' for static opacities, or 'v' for volitile |
Definition at line 65 of file opacity_add1subshell.cpp.
References ASSERT, t_rfield::ContBoltz, DEBUG_ENTRY, hydro, t_hydro::lgHInducImp, t_rfield::lgInducProcess, t_opac::lgRedoStatic, MAX2, MIN2, t_rfield::nflux, opac, t_opac::opacity_abs, t_opac::OpacStack, t_opac::OpacStatic, and rfield.
Referenced by OpacityAdd1Element(), and save_opacity().
void OpacityAddTotal | ( | void | ) |
OpacityAddTotal derive total opacity for this position
Definition at line 27 of file opacity_addtotal.cpp.
References t_opac::albedo, t_rfield::anu, ASSERT, atoms, ca, cdEXIT, t_rfield::ContBoltz, conv, csphot(), DEBUG_ENTRY, molezone::den, dense, diatoms, GrainVar::dstab, GrainVar::dstsc, t_dense::eden, EXIT_FAILURE, t_iso_sp::fb, findspecieslocal(), fixit(), t_opac::FreeFreeOpacity, t_dense::gas_phase, t_rfield::gff, gv, h2, t_hmi::H2_total, hmi, t_hmi::hmidep, hydro, t_opac::ica2ex, t_opac::ica2op, t_opac::ih2pnt, t_opac::ih2pof, t_opac::in1, ionbal, t_opac::iopcom, t_opac::ioppr, ioQQQ, diatomics::ip_photo_opac_offset, diatomics::ip_photo_opac_thresh, t_opac::ipBrems, ipCARBON, t_ionbal::ipCompRecoil, ipH1s, ipH2p, ipH2s, ipH3d, ipH3p, ipH3s, ipH4d, ipH4f, ipH4p, ipH4s, ipH_LIKE, ipHe1s1S, ipHE_LIKE, ipHELIUM, t_hmi::iphmin, t_opac::iphmop, t_opac::iphmra, ipHYDROGEN, ipMAGNESIUM, t_opac::ipmgex, ipNITROGEN, t_opac::ipo1exc, t_opac::ipo3exc, t_opac::ipo3exc3, ipoint(), t_opac::ipOpMgEx, ipOXYGEN, t_opac::ippr, t_opac::ipRayScat, isnan, iso_sp, GrainVar::lgDustOn(), t_dense::lgElmtOn, t_conv::lgSearch, t_mole_global::lgStancil, t_trace::lgTrace, LIMELM, t_mole_global::list, MALLOC, MIN2, mole, mole_global, t_ionbal::nCompRecoilElec, t_rfield::nflux, NISO, t_conv::nPres2Ioniz, t_mole_global::num_calc, t_iso_sp::numLevels_local, t_rfield::nupper, nzone, opac, t_opac::opacity_abs, t_opac::opacity_sct, OpacityAdd1Element(), OpacityAdd1Subshell(), OpacityZero(), OpacityZeroOld(), t_opac::OpacStack, t_opac::OpacStatic, t_rfield::otscon, t_rfield::otslin, oxy, t_atoms::p2nit, phycon, t_oxy::poiexc, t_oxy::poiii2, t_oxy::poiii3, t_ca::popca2ex, t_atoms::popmg2, POW2, rfield, SMALLFLOAT, t_mole_local::species, t_phycon::sqrte, t_iso_sp::st, t_opac::stimax, t_phycon::te, TE1RYD, trace, and t_dense::xIonDense.
Referenced by ConvBase().
void OpacityCreateAll | ( | void | ) |
OpacityCreateAll compute initial set of opacities for all species
Definition at line 126 of file opacity_createall.cpp.
References t_rfield::anu, t_rfield::AnuOrg, t_rfield::anusqr, ASSERT, cdEXIT, DEBUG_ENTRY, dense, diatoms, EVRYD, EXIT_FAILURE, t_iso_sp::fb, fixit(), t_ADfA::get_version(), GrainsInit(), t_iso_sp::HighestLevelOpacStack, hmi, hmiopc(), t_oxy::i2d, t_opac::ica2ex, t_opac::ica2op, t_opac::ih2pnt, t_opac::ih2pof, t_opac::in1, Singleton< t_ADfA >::Inst(), t_opac::iopcom, t_opac::iophe1, t_opac::iopo2d, t_opac::ioppr, ioQQQ, t_opac::ipBrems, t_opac::ipCKshell, t_opac::ipElement, ipH1s, ipH_LIKE, ipHE_LIKE, ipHELIUM, t_hmi::iphmin, t_opac::iphmop, t_opac::iphmra, ipHYDROGEN, t_opac::ipmgex, t_opac::ipo1exc, t_opac::ipo3exc, t_opac::ipo3exc3, ipoint(), t_opac::ipOpMgEx, ipOXYGEN, ipPOTASSIUM, t_opac::ippr, t_opac::ipRayScat, iso_sp, t_opac::lgCompileOpac, t_dense::lgElmtOn, lgOpacMalloced, lgRealloc, t_mole_global::lgStancil, t_trace::lgTrace, LIMELM, MALLOC, MIN2, MolDissocCrossSection(), mole_global, NCSH2P, ndimOpacityStack, t_rfield::nflux, t_opac::nOpacTot, t_iso_sp::numLevels_max, t_rfield::nupper, ofit(), opac, t_opac::opacity_abs, Opacity_iso_photo_cs(), opacity_more_memory(), OpacityCreate1Element(), OpacityCreatePowerLaw(), OpacityCreateReilMan(), OpacityValenceRescale(), t_opac::OpacStack, oxy, t_ADfA::phfit(), PHFIT96, pow(), POW2, POW3, rayleh(), rfield, and trace.
Referenced by cloudy(), and ParseCompile().
void OpacityZero | ( | void | ) |
OpacityZero - called by OpacityAddTotal to zero opacity array after saving it into oldopac
Definition at line 8 of file opacity_zero.cpp.
References DEBUG_ENTRY, t_opac::lgRedoStatic, t_rfield::nupper, t_opac::OldOpacSave, opac, t_opac::opacity_abs, t_opac::opacity_sct, t_opac::OpacStatic, and rfield.
Referenced by OpacityAddTotal(), SanityCheckBegin(), and save_opacity().
void OpacityZeroOld | ( | void | ) |
OpacityZeroOld - only set old opac to current value during search phase
Definition at line 37 of file opacity_zero.cpp.
References DEBUG_ENTRY, t_rfield::nupper, t_opac::OldOpacSave, opac, t_opac::opacity_abs, and rfield.
Referenced by OpacityAddTotal().
bool lgOpacMalloced |
set true when malloced, init to false
Definition at line 100 of file cdinit.cpp.
Referenced by OpacityCreateAll(), and tauff().
Definition at line 5 of file opacity.cpp.
Referenced by cdSPEC2(), ContCreatePointers(), ContRate(), ContSetIntensity(), ConvBase(), CoolCalc(), CoolEvaluate(), csphot(), DumpLine(), emergent_line(), GammaBn(), GammaK(), GammaPrt(), GammaPrtRate(), GammaPrtShells(), t_rfield::getCoarseTransCoef(), GrainRateDr(), highen(), HydroCSInterp(), diatomics::init(), InitDefaultsPreparse(), ion_photo(), ipShells(), iso_cascade(), iso_collide(), iso_level(), iso_photo(), iso_radiative_recomb(), iter_end_check(), IterEnd(), IterRestart(), IterStart(), lgConserveEnergy(), LimitSh(), lines_continuum(), lines_setup(), mole_effects(), mole_h_reactions(), opacity_more_memory(), OpacityAdd1Element(), OpacityAdd1Subshell(), OpacityAdd1SubshellInduc(), OpacityAddTotal(), OpacityCreate1Element(), OpacityCreateAll(), OpacityCreatePowerLaw(), OpacityCreateReilMan(), OpacityValenceRescale(), OpacityZero(), OpacityZeroOld(), outline_base_bin(), ParseCaseB(), ParseCommands(), ParseCompile(), ParseDont(), ParseSet(), ParseSphere(), ParseTauMin(), pltcon(), pltopc(), pnegopc(), PresTotCurrent(), PrtAllTau(), PrtComment(), PrtFinal(), PrtZone(), radius_first(), radius_increment(), radius_next(), rfield_opac_malloc(), rfield_opac_zero(), RT_continuum(), RT_DestProb(), RT_diffuse(), RT_iso_integrate_RRC(), RT_line_all(), RT_line_one_tau_reset(), RT_line_pumping(), RT_LineWidth(), RT_OTS(), RT_OTS_AddCont(), RT_OTS_AddLine(), RT_OTS_PrtRate(), RT_OTS_Update(), RT_recom_effic(), RT_tau_inc(), RT_tau_init(), RT_tau_reset(), RTesc_lya(), RTesc_lya_1side(), SanityCheckBegin(), Save_Line_RT(), save_opacity(), SaveDo(), SaveResults(), SaveSpecial(), state_get_put(), tauff(), TauZero(), zero(), t_fe2ovr_la::zero_opacity(), ZoneEnd(), and ZoneStart().