/home66/gary/public_html/cloudy/c13_branch/source/species2.cpp File Reference

#include "cddefines.h"
#include "atmdat.h"
#include "phycon.h"
#include "taulines.h"
#include "mole.h"
#include "mole_priv.h"
#include "atoms.h"
#include "string.h"
#include "thirdparty.h"
#include "dense.h"
#include "conv.h"
#include "h2.h"
#include "physconst.h"
#include "secondaries.h"
#include "thermal.h"
#include "cooling.h"
#include "lines_service.h"

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Functions
STATIC double	LeidenCollRate (long, long, const TransitionProxy &, double)
STATIC double	StoutCollRate (long ipSpecies, long ipCollider, const TransitionProxy &, double ftemp)
STATIC double	ChiantiCollRate (long ipSpecies, long ipCollider, const TransitionProxy &, double ftemp)
void	dBase_solve (void)
double	CHIANTI_Upsilon (long ipSpecies, long ipCollider, long ipHi, long ipLo, double ftemp)
Variables
static const bool	DEBUGSTATE = false
static double *	g
static double *	ex
static double *	pops
static double *	depart
static double *	source
static double *	sink
static double **	AulEscp
static double **	col_str
static double **	AulDest
static double **	AulPump
static double **	CollRate

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Function Documentation

double CHIANTI_Upsilon	(	long	,
		long	,
		long	,
		long	,
		double
	)

CHIANTI_Upsilon converts Chianti collision splines to collision strengths

Definition at line 692 of file species2.cpp.

References ASSERT, AtmolCollSplines, t_CollSplinesArray::collspline, dBaseSpecies, DEBUG_ENTRY, DEBUGSTATE, t_CollSplinesArray::EnergyDiff, t_CollSplinesArray::intTranType, ioQQQ, linint(), t_CollSplinesArray::nSplinePts, pow(), t_CollSplinesArray::ScalingParam, t_CollSplinesArray::SplineSecDer, and TotalInsanity().

Referenced by ChiantiCollRate(), and SaveDo().

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STATIC double ChiantiCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 666 of file species2.cpp.

References AtmolCollSplines, CHIANTI_Upsilon(), COLL_CONST, DEBUG_ENTRY, g, TransitionProxy::Hi(), t_CollSplinesArray::intTranType, ipELECTRON, TransitionProxy::ipHi(), TransitionProxy::ipLo(), and ipPROTON.

Referenced by dBase_solve().

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void dBase_solve

(

void

)

Todo:

0 this pointer should be cached one time, and the species removed from the list if it is not computed

Definition at line 33 of file species2.cpp.

References abund, ASSERT, atmdat, AtmolCollRateCoeff, atom_levelN(), AulDest, AulEscp, AulPump, cdEXIT, ChiantiCollRate(), t_species::chLabel, CollisionProxy::col_str(), col_str, COLL_CONST, colliders, CollisionZero(), CollRate, t_atmdat::collstrDefault, conv, CoolAdd(), t_species::CoolTotal, dBaseSpecies, dBaseStates, dBaseTrans, t_thermal::dCooldT, DEBUG_ENTRY, molezone::den, dense, depart, dsexp(), t_thermal::elementcool, EmLineZero(), TransitionProxy::EnergyWN(), ex, EXIT_FAILURE, Fe3_cs(), Fe4_cs(), Fe5_cs(), findspecieslocal(), t_species::fracIsotopologue, t_species::fracType, g, t_thermal::heating, ioQQQ, ipATOM_H, ipATOM_HE, ipELECTRON, ipH2, ipH2_ORTHO, ipH2_PARA, ipH2p, ipH_LIKE, ipHE_PLUS, ipHYDROGEN, ipNCOLLIDER, ipPROTON, iso_sp, LeidenCollRate(), t_species::lgActive, t_conv::lgSearch, LIMELM, MakeCS(), MALLOC, max(), MAX2, MIN2, nSpecies, t_conv::nTotalIoniz, null_molezone, t_species::numLevels_local, t_species::numLevels_max, phycon, pops, CollisionProxy::rate_coef_ul(), CollisionProxy::rate_coef_ul_set(), secondaries, sink, SMALLFLOAT, source, t_phycon::sqrte, StoutCollRate(), t_phycon::te, thermal, TotalInsanity(), t_iso_sp::trans(), t_secondaries::x12tot, t_dense::xIonDense, and t_dense::xNucleiTotal.

Referenced by CoolEvaluate().

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STATIC double LeidenCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 601 of file species2.cpp.

References AtmolCollRateCoeff, DEBUG_ENTRY, InterpCollRate(), TransitionProxy::ipHi(), and TransitionProxy::ipLo().

Referenced by dBase_solve().

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STATIC double StoutCollRate	(	long	ipSpecies,
		long	ipCollider,
		const TransitionProxy &	tr,
		double	ftemp
	)

Definition at line 609 of file species2.cpp.

References ASSERT, COLL_CONST, t_StoutColls::collstrs, DEBUG_ENTRY, g, TransitionProxy::Hi(), TransitionProxy::ipHi(), TransitionProxy::ipLo(), t_StoutColls::lgIsRate, linint(), MALLOC, t_StoutColls::ntemps, StoutCollData, and t_StoutColls::temps.

Referenced by dBase_solve().

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Variable Documentation

double ** AulDest [static]

Definition at line 29 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3Lev14(), and Fe4Lev12().

double** AulEscp [static]

Definition at line 29 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe4Lev12(), and PutLine_base().

double ** AulPump [static]

Definition at line 29 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3Lev14(), and Fe4Lev12().

double ** col_str [static]

Definition at line 29 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3_cs(), Fe3Lev14(), Fe4Lev12(), Fe5_cs(), FeIICollRatesBoltzmann(), H21_cm_pops(), hydro_vs_deexcit(), my_Integrand_VF01_E::operator()(), and my_Integrand_S62::operator()().

double ** CollRate [static]

Definition at line 29 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3Lev14(), Fe4Lev12(), and diatomics::H2_X_coll_rate_evaluate().

const bool DEBUGSTATE = false [static]

Definition at line 26 of file species2.cpp.

double * depart [static]

Definition at line 28 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3Lev14(), and Fe4Lev12().

double * ex [static]

Definition at line 28 of file species2.cpp.

Referenced by atom_pop3(), dBase_solve(), Fe2_cooling(), t_ADfA::hpfit(), iso_cascade(), iso_error_generation(), iso_radiative_recomb_effective(), lines_hydro(), PrtHydroTrace1(), and RT_line_all().

double* g [static]

Definition at line 28 of file species2.cpp.

Referenced by atmdat_CHIANTI_readin(), atmdat_LAMDA_readin(), atmdat_readin(), atmdat_STOUT_readin(), atom_level2(), atom_level3(), AtomSeqBeryllium(), AtomSeqBoron(), ChiantiCollRate(), ColStrGBar(), ContCreatePointers(), CoolCarb(), CoolIron(), CoolNick(), CoolNitr(), CoolOxyg(), CoolSili(), CoolSulf(), dBase_solve(), DoFSMixing(), FeIICollRatesBoltzmann(), FeIICreate(), FeIILevelPops(), FeIILyaPump(), FeIIPoint(), FeIIPunchColden(), FeIIPunchLevels(), FillExtraLymanLine(), GammaBn(), H21_cm_pops(), diatomics::H2_Level_low_matrix(), diatomics::H2_LevelPops(), diatomics::H2_PunchDo(), diatomics::H2_zero_pops_too_low(), Hion_coll_ioniz_ratecoef(), HydroCSInterp(), HydroRecCool(), HyperfineCreate(), diatomics::init(), iso_create(), iso_level(), iso_satellite(), iso_satellite_update(), LineConvRate2CS(), lines_setup(), mie_cs_size_distr(), OccupationNumberLine(), oi_level_pops(), PressureRadiationLine(), PrtHydroTrace1(), radius_first(), ReadBadnellAIData(), RT_line_pumping(), Save1Line(), Save1LineData(), Save_Line_RT(), SaveGaunts(), scqdri(), diatomics::SolveExcitedElectronicLevels(), diatomics::SolveSomeGroundElectronicLevels(), states_propprint(), StoutCollRate(), and TexcLine().

double * pops [static]

Definition at line 28 of file species2.cpp.

Referenced by AtomSeqBoron(), dBase_solve(), Fe2_cooling(), Fe3Lev14(), and Fe4Lev12().

double * sink [static]

Definition at line 28 of file species2.cpp.

Referenced by dBase_solve(), fill_array(), and iso_level().

double * source [static]

Definition at line 28 of file species2.cpp.

Referenced by dBase_solve(), ion_solver(), iso_level(), mole_create_react(), mole_eval_dynamic_balance(), newreact(), and PrintRates().