t_save Struct Reference

#include <save.h>

Collaboration diagram for t_save:

Public Member Functions
	t_save ()
	~t_save ()
void	SaveLineListFree (long i)
void	SaveAverageFree (long i)
Data Fields
long	nLineList [LIMPUN]
vector< char * >	chLineListLabel [LIMPUN]
vector< realnum >	wlLineList [LIMPUN]
bool	lgLineListRatio [LIMPUN]
long	nAverageList [LIMPUN]
vector< char * >	chAverageType [LIMPUN]
vector< char * >	chAverageSpeciesLabel [LIMPUN]
vector< int >	nAverageIonList [LIMPUN]
vector< int >	nAverage2ndPar [LIMPUN]
FILE *	ipPnunit [LIMPUN]
bool	lgNoClobber [LIMPUN]
bool	lgPunConv_noclobber
bool	lgDROn_noclobber
bool	lgPunPoint_noclobber
bool	lgioRecom_noclobber
bool	lgQHSaveFile_noclobber
bool	lgTraceConvergeBase_noclobber
bool	lgSaveGrid_noclobber
bool	lgRealSave [LIMPUN]
bool	lgEmergent [LIMPUN]
bool	lgCumulative [LIMPUN]
long int	nsave
char	chSave [LIMPUN][5]
diatomics *	whichDiatomToPrint [LIMPUN]
char	chOpcTyp [LIMPUN][5]
char	chHeader [LIMPUN][MAX_HEADER_SIZE]
const char *	chNONSENSE
bool	lgSaveToSeparateFiles [LIMPUN]
bool	lg_separate_iterations [LIMPUN]
bool	lgPunHeader [LIMPUN]
bool	lgPunContinuum
realnum	punarg [LIMPUN][3]
string	optname [LIMPUN]
bool	lgSaveEveryZone [LIMPUN]
long int	nSaveEveryZone [LIMPUN]
char	chSaveArgs [LIMPUN][5]
char	chSaveSpecies [LIMPUN][CHARS_SPECIES]
bool	lgPunLstIter [LIMPUN]
bool	lgFITS [LIMPUN]
int	FITStype [LIMPUN]
bool	lgPunchFits
const char *	chConPunEnr [LIMPUN]
long int	ipConPun
bool	lgHashEndIter [LIMPUN]
char	chHashString [INPUT_LINE_LENGTH]
bool	lgFLUSH
string	chGridPrefix
string	chFilenamePrefix
string	chRedirectPrefix
char	chPunRltType [7]
FILE *	ipPoint
bool	lgPunPoint
bool	lgPunConv
FILE *	ipPunConv
FILE *	ipDRout
bool	lgDROn
bool	lgDRPLst
bool	lgDRHash
bool	lgTraceConvergeBase
bool	lgTraceConvergeBaseHash
FILE *	ipTraceConvergeBase
FILE *	ioRecom
bool	lgioRecom
long int	LinEvery
bool	lgLinEvery
long int	ncSaveSkip
realnum	WeakHeatCool
realnum	Resolution
realnum	ResolutionAbs
char	chSpeciesDominantRates [LIMPUN][CHARS_SPECIES]
Energy	emisfreq
long	ipEmisFreq

Detailed Description

Definition at line 135 of file save.h.

Constructor & Destructor Documentation

t_save::t_save ( ) [inline]

Definition at line 137 of file save.h.

References FITStype, lgFITS, LIMPUN, nAverageList, and nLineList.

t_save::~t_save ( ) [inline]

Definition at line 148 of file save.h.

References LIMPUN, SaveAverageFree(), and SaveLineListFree().

Here is the call graph for this function:

Member Function Documentation

void t_save::SaveAverageFree ( long i ) [inline]

Definition at line 164 of file save.h.

References chAverageSpeciesLabel, and chAverageType.

Referenced by parse_save_average(), and ~t_save().

void t_save::SaveLineListFree ( long i ) [inline]

Definition at line 157 of file save.h.

References chLineListLabel, and wlLineList.

Referenced by ParseSave(), and ~t_save().

Field Documentation

vector<char*> t_save::chAverageSpeciesLabel[LIMPUN]

chAverageSpeciesLabel is label for species

Definition at line 190 of file save.h.

Referenced by parse_save_average(), save_average(), and SaveAverageFree().

vector<char*> t_save::chAverageType[LIMPUN]

chAverageType is label for type of average

Definition at line 188 of file save.h.

Referenced by parse_save_average(), save_average(), and SaveAverageFree().

const char* t_save::chConPunEnr[LIMPUN]

chConPunEnr - units of continuum in save output

Definition at line 284 of file save.h.

Referenced by AnuUnit(), ChkUnits(), ParseSave(), Save1Line(), and Save1LineData().

string t_save::chFilenamePrefix

this is a prefix that will be set at the start of all save file names normally an empty string, set with PUNCH PREFIX command or -p flag

Definition at line 306 of file save.h.

Referenced by cdMain(), ParseSave(), ParseSet(), and process_output().

string t_save::chGridPrefix

this is a prefix that will be used at the start of all file names when doing an MPI grid run, normally an empty string, set with -g flag

Definition at line 302 of file save.h.

Referenced by cdMain(), and ParseSave().

char t_save::chHashString[INPUT_LINE_LENGTH]

this is the hash string, normally a set of hash marks, can be reset with set save hash command

Definition at line 295 of file save.h.

Referenced by check_grid_file(), ConvBase(), InitDefaultsPreparse(), ParseSet(), radius_first(), SaveDo(), and SaveLineStuff().

char t_save::chHeader[LIMPUN][MAX_HEADER_SIZE]

Definition at line 231 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveFilesInit().

vector<char*> t_save::chLineListLabel[LIMPUN]

chLineListLabel is label for line list

Definition at line 178 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveLineListFree().

const char* t_save::chNONSENSE

Definition at line 233 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveFilesInit().

char t_save::chOpcTyp[LIMPUN][5]

which opacity to save out

Definition at line 229 of file save.h.

Referenced by ParseSave(), and save_opacity().

char t_save::chPunRltType[7]

set with save line intensities and save results commands, says whether results arrays produced by routine PunResults1Line should be column or array

Definition at line 315 of file save.h.

Referenced by ParseSave(), and SaveResults1Line().

string t_save::chRedirectPrefix

this is the prefix that will be set at the start of the input and output file normally an empty string, set with -p or -r flag

Definition at line 310 of file save.h.

Referenced by cdMain(), main(), process_output(), and vary_input().

char t_save::chSave[LIMPUN][5]

chSave - what is it we want to save? set in GetPunch, used in DoPunch

Definition at line 225 of file save.h.

Referenced by diatomics::H2_ParseSave(), ParseSave(), and SaveDo().

char t_save::chSaveArgs[LIMPUN][5]

set of optional arguments for save command, but as a string

Definition at line 265 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveSpecies().

char t_save::chSaveSpecies[LIMPUN][CHARS_SPECIES]

Definition at line 267 of file save.h.

Referenced by ParseSave(), and SaveSpecies().

char t_save::chSpeciesDominantRates[LIMPUN][CHARS_SPECIES]

Definition at line 364 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and SaveDo().

Energy t_save::emisfreq

Definition at line 367 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and SaveDo().

int t_save::FITStype[LIMPUN]

which FITS type is in this file

Definition at line 277 of file save.h.

Referenced by ParseSave(), process_output(), and t_save().

FILE* t_save::ioRecom

option to save recombination coefficients to external file

Definition at line 341 of file save.h.

Referenced by atmdat_3body(), CloseSaveFiles(), ion_recomb(), iso_radiative_recomb(), ParseSave(), and SaveFilesInit().

long int t_save::ipConPun

this global variable is index of save command loop in dopunch

Definition at line 287 of file save.h.

Referenced by AnuUnit(), Save1Line(), Save1LineData(), SaveDo(), and SaveSpecies().

FILE* t_save::ipDRout

these control saving choice of dr - this is not really a save command ipDRout is io unit, lgDROn says saving dr logic has been set, and lgDRPLst says to save the last iteration

Definition at line 330 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), radius_first(), radius_next(), and SaveFilesInit().

long t_save::ipEmisFreq

Definition at line 368 of file save.h.

Referenced by InitDefaultsPreparse(), and SaveDo().

FILE* t_save::ipPnunit[LIMPUN]

this is the file where we will direct the output

Definition at line 197 of file save.h.

Referenced by CloseSaveFiles(), parse_save_average(), ParseSave(), save_average(), SaveDo(), and SaveFilesInit().

FILE* t_save::ipPoint

option to save out pointers with save pointers command ipPoint is save file handle, lgPunPoint says whether we will do it

Definition at line 320 of file save.h.

Referenced by CloseSaveFiles(), OpacityCreate1Element(), ParseSave(), and SaveFilesInit().

FILE* t_save::ipPunConv

Definition at line 325 of file save.h.

Referenced by CloseSaveFiles(), ConvIterCheck(), ParseSave(), and SaveFilesInit().

FILE* t_save::ipTraceConvergeBase

Definition at line 338 of file save.h.

Referenced by CloseSaveFiles(), ConvBase(), ParseSave(), and SaveFilesInit().

bool t_save::lg_separate_iterations[LIMPUN]

option to not insert end-of-iteration separator - used for save files that create one line per iteration

Definition at line 242 of file save.h.

Referenced by check_grid_file(), InitDefaultsPreparse(), ParseSave(), and SaveDo().

bool t_save::lgCumulative[LIMPUN]

cumulative line intensities for time dependent sim

Definition at line 219 of file save.h.

Referenced by ParseSave(), and SaveDo().

bool t_save::lgDRHash

Definition at line 331 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and radius_first().

bool t_save::lgDROn

Definition at line 331 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), radius_first(), radius_next(), and SaveFilesInit().

bool t_save::lgDROn_noclobber

Definition at line 204 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgDRPLst

Definition at line 331 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and radius_next().

bool t_save::lgEmergent[LIMPUN]

emergent or intrinsic line intensities

Definition at line 216 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveLineIntensity().

bool t_save::lgFITS[LIMPUN]

flag saying that this save file is in FITS format

Definition at line 274 of file save.h.

Referenced by check_grid_file(), CloseSaveFiles(), ParseSave(), SaveDo(), and t_save().

bool t_save::lgFLUSH

flush file after every iteration

Definition at line 298 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSet(), and SaveDo().

bool t_save::lgHashEndIter[LIMPUN]

should hash marks be printed after every iteration? default is yes, set no with no hash option on save command

Definition at line 291 of file save.h.

Referenced by check_grid_file(), InitDefaultsPreparse(), ParseSave(), and SaveDo().

bool t_save::lgioRecom

Definition at line 342 of file save.h.

Referenced by atmdat_3body(), CloseSaveFiles(), ion_recomb(), iso_radiative_recomb(), ParseSave(), and SaveFilesInit().

bool t_save::lgioRecom_noclobber

Definition at line 206 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgLineListRatio[LIMPUN]

flag saying whether to take ratio (true) of pairs

Definition at line 182 of file save.h.

Referenced by ParseSave(), and SaveDo().

bool t_save::lgLinEvery

Definition at line 347 of file save.h.

Referenced by ParseSave(), and SaveDo().

bool t_save::lgNoClobber[LIMPUN]

option to append instead of overwrite

Definition at line 200 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgPunchFits

option to say whether any FITS output should be punched, initialized to false, but turned to true after last grid exec.

Definition at line 281 of file save.h.

bool t_save::lgPunContinuum

flag saying whether any save continuum commands were entered set true in parsecontinuum when save continuum entered, used in PrtComment to warn if continuum punched with no iterations

Definition at line 251 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and PrtComment().

bool t_save::lgPunConv

unit number, and flag, for saving reason for continued iterations

Definition at line 324 of file save.h.

Referenced by CloseSaveFiles(), ConvIterCheck(), ParseSave(), and SaveFilesInit().

bool t_save::lgPunConv_noclobber

these are for some special cases, same purpose as previous no clobber

Definition at line 203 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgPunHeader[LIMPUN]

flag saying whether we should save headers. Used in grid punches so that the header only gets punched once.

Definition at line 246 of file save.h.

Referenced by ParseSave(), PrtColumns(), SaveDo(), SaveFilesInit(), SaveSpecies(), and SaveSpeciesOne().

bool t_save::lgPunLstIter[LIMPUN]

lg flag lgPunLstIter for this save option, do we only want to save on last iteration?

Definition at line 271 of file save.h.

Referenced by ParseSave(), and SaveDo().

bool t_save::lgPunPoint

Definition at line 321 of file save.h.

Referenced by CloseSaveFiles(), OpacityCreate1Element(), ParseSave(), and SaveFilesInit().

bool t_save::lgPunPoint_noclobber

Definition at line 205 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgQHSaveFile_noclobber

Definition at line 207 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgRealSave[LIMPUN]

is this a real save command, or one of the similar options like save dr, which is not done in save files

Definition at line 213 of file save.h.

Referenced by ParseSave(), SaveDo(), and SaveFilesInit().

bool t_save::lgSaveEveryZone[LIMPUN]

implement save every option - lgSaveEveryZone true if want to save every zone, nSaveEveryZone is number of zones to save

Definition at line 261 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and SaveDo().

bool t_save::lgSaveGrid_noclobber

Definition at line 209 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgSaveToSeparateFiles[LIMPUN]

this flag tells us whether to save results of a grid to separate files for each grid point or all to the same file. Different for different save commands

Definition at line 238 of file save.h.

Referenced by ParseSave(), and process_output().

bool t_save::lgTraceConvergeBase

Definition at line 336 of file save.h.

Referenced by CloseSaveFiles(), ConvBase(), ParseSave(), and SaveFilesInit().

bool t_save::lgTraceConvergeBase_noclobber

Definition at line 208 of file save.h.

Referenced by CloseSaveFiles(), ParseSave(), and SaveFilesInit().

bool t_save::lgTraceConvergeBaseHash

Definition at line 336 of file save.h.

Referenced by ConvBase(), InitDefaultsPreparse(), and ParseSave().

long int t_save::LinEvery

option to save line intensities every for every zone logical variable says whether LinEvery was set

Definition at line 346 of file save.h.

Referenced by ParseSave(), and SaveDo().

vector<int> t_save::nAverage2ndPar[LIMPUN]

nAverage2ndPar is set of second parameters for averages

Definition at line 194 of file save.h.

Referenced by parse_save_average(), and save_average().

vector<int> t_save::nAverageIonList[LIMPUN]

nAverageIonList is set of ions for averages

Definition at line 192 of file save.h.

Referenced by parse_save_average(), and save_average().

long t_save::nAverageList[LIMPUN]

following are for save averages option nAverageList is number of averages, -1 if not defined

Definition at line 186 of file save.h.

Referenced by parse_save_average(), save_average(), and t_save().

long int t_save::ncSaveSkip

set skip sets this variable, which says how many cells to skip in save

Definition at line 350 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSet(), and SaveDo().

long t_save::nLineList[LIMPUN]

following are for save LineList option nLineList is number of em lines, -1 if not defined

Definition at line 176 of file save.h.

Referenced by ParseSave(), SaveDo(), and t_save().

long int t_save::nsave

number of save commands entered

Definition at line 222 of file save.h.

Referenced by ChkUnits(), CloseSaveFiles(), diatomics::H2_ParseSave(), InitDefaultsPreparse(), ParseSave(), process_output(), and SaveDo().

long int t_save::nSaveEveryZone[LIMPUN]

Definition at line 262 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSave(), and SaveDo().

string t_save::optname[LIMPUN]

punarg is set of optional arguments for the save command

Definition at line 257 of file save.h.

Referenced by ParseSave(), and SaveDo().

realnum t_save::punarg[LIMPUN][3]

punarg is set of optional arguments for the save command

Definition at line 254 of file save.h.

Referenced by diatomics::H2_ParseSave(), diatomics::H2_PunchDo(), ParseSave(), save_opacity(), SaveDo(), and SaveLineIntensity().

realnum t_save::Resolution

contrast factor for lines to continuum in save output default is 1 (gives correct line intensities) and changed with set width command (enters width in km/sec)

Definition at line 359 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSet(), and SaveDo().

realnum t_save::ResolutionAbs

Definition at line 362 of file save.h.

Referenced by InitDefaultsPreparse(), ParseSet(), and PrettyTransmission().

realnum t_save::WeakHeatCool

threshold for faintest cooling or heating to be punched default is set to 0.05 in scalar, can be reset with 'set weakheatcool'

Definition at line 354 of file save.h.

Referenced by CoolSave(), InitDefaultsPreparse(), ParseSet(), and SaveHeat().