/home66/gary/public_html/cloudy/c10_branch/source/mole_h_step.cpp File Reference

#include "cddefines.h"
#include "physconst.h"
#include "iso.h"
#include "atmdat.h"
#include "grainvar.h"
#include "ionbal.h"
#include "dense.h"
#include "secondaries.h"
#include "mole.h"
#include "mole_co_priv.h"
#include "opacity.h"
#include "rfield.h"
#include "thermal.h"
#include "timesc.h"
#include "trace.h"
#include "phycon.h"
#include "doppvel.h"
#include "thirdparty.h"
#include "gammas.h"
#include "h2.h"
#include "dynamics.h"
#include "conv.h"
#include "radius.h"
#include "hextra.h"
#include "hmi.h"
#include "taulines.h"
Include dependency graph for mole_h_step.cpp:

Go to the source code of this file.

Data Structures

struct  Hmole_rate_s

Defines

#define ABSLIM   1e-12
#define INTSZ(a)   (sizeof(a)/sizeof(int))
#define CATALYST   true
#define USE_MCCALL
#define FACTOR   2.25
#define OLD_FRAC   0.0
#define CO_ON   true
#define MOLMIN   1
#define N_H_MAT   (N_H_MOLEC-MOLMIN)
#define MAT(a, I_, J_)   (*((a)+(I_)*(N_H_MAT)+(J_)))

Typedefs

typedef struct Hmole_rate_s reaction

Functions

reactionnewreaction (int rindex, int *in, int nin, int *out, int nout, int *rate, int nrate)
void hmole_step (int *nFixup, double *error)

Define Documentation

#define ABSLIM   1e-12

Definition at line 51 of file mole_h_step.cpp.

#define CATALYST   true

Referenced by hmole_step().

#define CO_ON   true

Referenced by hmole_step().

#define FACTOR   2.25

Referenced by hmole_step().

#define INTSZ (  )     (sizeof(a)/sizeof(int))

Definition at line 54 of file mole_h_step.cpp.

Referenced by hmole_step().

#define MAT ( a,
I_,
J_   )     (*((a)+(I_)*(N_H_MAT)+(J_)))
#define MOLMIN   1
#define N_H_MAT   (N_H_MOLEC-MOLMIN)
#define OLD_FRAC   0.0

Referenced by hmole_step().

#define USE_MCCALL

Typedef Documentation

typedef struct Hmole_rate_s reaction

Definition at line 65 of file mole_h_step.cpp.


Function Documentation

void hmole_step ( int *  nFixup,
double *  error 
)

Take one Newton step of the chemical network

Parameters:
*nFixup 
*error 

HeatH2Dexc_used is heating due to collisional deexcitation of vib-excited H2 actually used

these are derivative wrt temp for collisional processes within X

Todo:
2 - put in actual composition dependent Tad - this is only valid for bare surfaces - not ice - for ice Tad is 555K hmi.Tad is binding energy expressed as a temperature note that hmi.Tad is set to 800. in zero tau_nu the first equation in section 2.5 equation one paragraph before equation 2 at low grain temperatures all end in para, J=0
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 process is net source term for H(n=3) states, must be added in
Todo:
2 process is net ionization term for H(n=3) states
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
0 update photoelectric opacity for H2 to include real cross sections and energies. this is not a higher priority because when H2 is formed there can be very little ionizing radiation. this process must be trivial compared with the Solomon process following reference gives cross section for all energies >>refer H2 photo cs Yan, M., Sadeghpour, H.R., & Dalgarno, A., 1998, ApJ, 496, 1044 Wilms, J., Allen, A., & McCray, R. 2000, ApJ, 542, 914
Todo:
0 must include heating, Compton ionization
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? reverse of this reaction i not in detailed balance,why? GS
Todo:
2 this rate drives numerical instability in such models as secondary1 and 2.in
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 must add process H2+ + H- => H2 + H, Dalgarno&Lepp 87
Todo:
2 put in H2+ + gamma => H + H+
Todo:
1 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
2 equivalent reaction for H2* is not included in chemistry, Big h2 does not include this reaction, what to do? GS
Todo:
0 had to comment following test out - NA change to hmole caused massive prints

Definition at line 154 of file mole_h_step.cpp.

References t_phycon::alogte, amat, ASSERT, t_hmi::assoc_detach, t_hmi::assoc_detach_backwards_exct, t_hmi::assoc_detach_backwards_grnd, atmdat, t_dense::AtomicWeight, t_hmi::Average_A, t_hmi::Average_collH2_deexcit, t_hmi::Average_collH2_excit, t_hmi::Average_collH2s_dissoc, t_hmi::Average_collH_deexcit, t_hmi::Average_collH_excit, t_hmi::bh2dis, t_hmi::bh2h22hh2, t_hmi::bh2h2p, GrainVar::bin, t_co::C_H3OP_HCOP_H2_1, t_co::C_OH_CO_H_1, CATALYST, cdEXIT, t_hmi::chJura, t_co::CHP_H2O_HCOP_H2_1, t_co::CHP_OH_COP_H2_1, co, CO_findrk(), CO_ON, t_ionbal::CompRecoilIonRate, t_rfield::ConInterOut, conv, t_co::CP_H2O_HCOP_H_1, t_co::CP_OH_CO_HP_1, t_co::CP_OH_COP_H_1, t_hmi::CR_reac_H2g, t_hmi::CR_reac_H2s, t_co::crnu_CH3_CH2_H, t_co::crnu_CH3_CH_H2, t_co::crnu_CH4_CH2_H2, t_co::crnu_CH_C_H, t_co::crnu_CHP_CP_H, t_co::crnu_H2O_OH_H, t_co::crnu_OH_O_H, t_co::crnu_SiH_Si_H, t_hextra::cryden_ov_background, t_secondaries::csupra, DEBUG_ENTRY, dense, t_iso::DepartCoef, t_hmi::deriv_HeatH2Dexc_BD96, t_hmi::deriv_HeatH2Dexc_BHT90, t_hmi::deriv_HeatH2Dexc_BigH2, t_hmi::deriv_HeatH2Dexc_ELWERT, t_hmi::deriv_HeatH2Dexc_TH85, t_hmi::deriv_HeatH2Dexc_used, dynamics, t_co::e_CH2P_C_H2, t_co::e_CH2P_C_H_H, t_co::e_CH2P_CH_H, t_co::e_CH3P_C_H2_H, t_co::e_CH3P_CH2_H, t_co::e_CH3P_CH_H2, t_co::e_CH3P_CH_H_H, t_co::e_CH4P_CH2_H_H, t_co::e_CH4P_CH3_H, t_co::e_CH5P_CH3_H2, t_co::e_CH5P_CH4_H, t_co::e_CHP_C_H, t_co::e_H2OP_O_H2, t_co::e_H2OP_O_H_H, t_co::e_H2OP_OH_H, t_co::e_H3OP_H2O_H, t_co::e_H3OP_O_H2_H, t_co::e_H3OP_OH_H2, t_co::e_H3OP_OH_H_H, t_co::e_HCOP_CO_H, t_co::e_OHP_O_H, t_co::e_SiH2P_Si_H2, t_co::e_SiH2P_Si_H_H, t_co::e_SiH2P_SiH_H, t_co::e_SiOHP_SiO_H, t_dense::eden, t_hmi::eh2hh, t_hmi::eh3_h2h, EVDEGK, t_hmi::exphmi, t_rfield::extin_mag_V_point, FACTOR, findspecies(), fixit(), t_rfield::flux, fnzone, GammaK(), t_iso::gamnc, t_dense::gas_phase, GetAveVelocity(), GrainDrive(), gv, h2, t_co::H2_C2HP_C2H2P_H, t_co::H2_C2P_C2HP_H, t_co::H2_C3P_C3HP_H, t_co::H2_C_CH2_nu, t_co::H2_C_CH_H, t_co::H2_CH2_CH3_H, t_co::H2_CH2P_CH3P_H, t_co::H2_CH3_CH4_H, t_co::H2_CH3P_CH5P_nu, t_co::H2_CH4P_CH5P_H, t_co::H2_CH_C_H2_H, t_co::H2_CH_CH2_H, t_co::H2_CH_CH3_nu, t_co::H2_CHP_CH2P_H, t_co::H2_ClP_HClP_H, t_co::H2_CN_HCN_H, t_co::H2_CNP_HCNP_H, t_co::H2_COP_HCOP_H, t_co::H2_CP_CH2P_nu, t_co::H2_CP_CHP_H, t_co::H2_CSP_HCSP_H, t_hmi::H2_formation_scale, t_hmi::H2_forms_grains, t_hmi::H2_forms_hminus, t_hmi::H2_frac_abund_set, t_hmi::H2_H2g_to_H2s_rate_used, t_co::H2_H2O_OH_H2_H, t_co::H2_H2OP_H3OP_H, t_co::H2_HClP_H2ClP_H, t_co::H2_HCNP_HCNHP_H, t_co::H2_N_NH_H, t_co::H2_NH2_NH3_H, t_co::H2_NH2P_NH3P_H, t_co::H2_NH3P_NH4P_H, t_co::H2_NH_NH2_H, t_co::H2_NHP_N_H3P, t_co::H2_NHP_NH2P_H, t_co::H2_NP_NHP_H, t_co::H2_O2_O_O_H2, t_co::H2_O2_OH_OH, t_co::H2_O_OH_H, t_co::H2_OH_H2O_H, t_co::H2_OH_O_H2_H, t_co::H2_OHP_H2OP_H, t_co::H2_OP_OHP_H, t_hmi::H2_photo_heat_hard, t_hmi::H2_photo_heat_soft, t_hmi::H2_photodissoc_used_H2g, t_hmi::H2_photodissoc_used_H2s, t_hmi::H2_photoionize_rate, t_hmi::H2_rate_destroy, t_co::H2_S_HS_H, t_co::H2_SiOP_SiOHP_H, t_co::H2_SiP_SiH2P_nu, t_hmi::H2_Solomon_dissoc_rate_used_H2g, t_hmi::H2_Solomon_dissoc_rate_used_H2s, t_co::H2_SP_HSP_H, t_hmi::H2_total, t_hmi::H2_tripletdissoc_H2g, t_hmi::H2_tripletdissoc_H2s, t_hmi::h2ge2h, t_hmi::h2h22hh2, t_hmi::h2hph3p, t_hmi::H2Opacity, t_co::H2P_C2_C2HP_H, t_co::H2P_C2_C2P_H2, t_co::H2P_C2H2_C2H2P_H2, t_co::H2P_C2H2_C2H3P_H, t_co::H2P_C2H_C2H2P_H, t_co::H2P_C2H_C2HP_H2, t_co::H2P_C_CHP_H, t_co::H2P_CH2_CH2P_H2, t_co::H2P_CH2_CH3P_H, t_co::H2P_CH4_CH3P_H2, t_co::H2P_CH4_CH4P_H2, t_co::H2P_CH4_CH5P_H, t_co::H2P_CH_CH2P_H, t_co::H2P_CH_CHP_H2, t_co::H2P_CN_CNP_H2, t_co::H2P_CN_HCNP_H, t_co::H2P_CO_COP_H2, t_co::H2P_CO_HCOP_H, t_co::H2P_H2O_H2OP_H2, t_co::H2P_H2O_H3OP_H, t_co::H2P_HCN_HCNP_H2, t_co::H2P_N_NHP_H, t_co::H2P_NH2_NH2P_H2, t_co::H2P_NH3_NH3P_H2, t_co::H2P_NH_NH2P_H, t_co::H2P_NH_NHP_H2, t_co::H2P_NO_HNOP_H, t_co::H2P_NO_NOP_H2, t_co::H2P_O2_O2P_H2, t_co::H2P_O_OHP_H, t_co::H2P_OH_H2OP_H, t_co::H2P_OH_OHP_H2, t_hmi::h2ph3p, t_hmi::h2phmh2h, t_hmi::h2plus_heat, t_co::H2s_C_CH_H, t_co::H2s_CH2_CH3_H, t_co::H2s_CH3_CH4_H, t_co::H2s_CH_C_H2_H, t_co::H2s_CH_CH2_H, t_co::H2s_CH_CH3_nu, t_co::H2s_CP_CHP_H, t_co::H2s_H2O_OH_H2_H, t_co::H2s_O2_O_O_H2, t_co::H2s_O_OH_H, t_co::H2s_OH_H2O_H, t_co::H2s_OH_O_H2_H, t_co::H2s_OP_OHP_H, t_hmi::h2s_sp_decay, t_hmi::h2se2h, t_hmi::h2sh, t_hmi::h2sh2g, t_hmi::h2sh2sh2g2h, t_hmi::h2sh2sh2s2h, t_hmi::H2star_forms_grains, t_hmi::H2star_forms_hminus, t_hmi::h32h2, t_co::H3P_C2_C2HP_H2, t_co::H3P_C2H2_C2H3P_H2, t_co::H3P_C2H_C2H2P_H2, t_co::H3P_C3_C3HP_H2, t_co::H3P_C_CHP_H2, t_co::H3P_CH2_CH3P_H2, t_co::H3P_CH3_CH4P_H2, t_co::H3P_CH4_CH5P_H2, t_co::H3P_CH_CH2P_H2, t_co::H3P_Cl_HClP_H2, t_co::H3P_CN_HCNP_H2, t_co::H3P_CO_HCOP_H2, t_co::H3P_CS_HCSP_H2, t_co::H3P_H2O_H3OP_H2, t_co::H3P_HCl_H2ClP_H2, t_co::H3P_HCN_HCNHP_H2, t_co::H3P_NH2_NH3P_H2, t_co::H3P_NH3_NH4P_H2, t_co::H3P_NH_NH2P_H2, t_co::H3P_NO2_NOP_OH_H2, t_co::H3P_NO_HNOP_H2, t_co::H3P_O_OHP_H2, t_co::H3P_OH_H2OP_H2, t_co::H3P_S_HSP_H2, t_co::H3P_SiH_SiH2P_H2, t_co::H3P_SiO_SiOHP_H2, t_hmi::h3petc, t_hmi::h3ph2hp, t_hmi::h3ph2p, t_hmi::h3phm2h2, t_hmi::h3phmh2hh, t_co::H_C2H3P_C2H2P_H2, t_co::H_C_CH_nu, t_co::H_CH2_CH_H2, t_co::H_CH3_CH2_H2, t_co::H_CH3P_CH2P_H2, t_co::H_CH4P_CH3P_H2, t_co::H_CH5P_CH4P_H2, t_co::H_CH_C_H2, t_co::H_CH_C_H_H, t_co::H_CHP_CP_H2, t_co::H_CNP_CN_HP, t_co::H_COP_CO_HP, t_co::H_CP_CHP_nu, t_co::H_H2O_OH_H2, t_co::H_H2O_OH_H_H, t_co::H_HCNP_HCN_HP, t_co::H_HNC_HCN_H, t_co::H_HSP_SP_H2, t_co::H_N2P_N2_HP, t_co::H_OH_H2O_nu, t_co::H_OH_O_H2, t_co::H_OH_O_H_H, t_hmi::HalphaHmin, t_atmdat::HCharExcIonOf, t_atmdat::HCharExcRecTo, t_hmi::HeatH2Dexc_BD96, t_hmi::HeatH2Dexc_BHT90, t_hmi::HeatH2Dexc_BigH2, t_hmi::HeatH2Dexc_ELWERT, t_hmi::HeatH2Dexc_TH85, t_hmi::HeatH2Dexc_used, t_hmi::HeatH2Dish_BD96, t_hmi::HeatH2Dish_BHT90, t_hmi::HeatH2Dish_BigH2, t_hmi::HeatH2Dish_ELWERT, t_hmi::HeatH2Dish_TH85, t_hmi::HeatH2Dish_used, t_phoHeat::HeatHiEnr, t_phoHeat::HeatLowEnr, t_phoHeat::HeatNet, t_hmi::hehph2h3phe, t_co::HeP_CH2_CHP_He_H, t_co::HeP_CH2_CP_He_H2, t_co::HeP_CH_CP_He_H, t_co::HeP_H2O_OH_He_HP, t_co::HeP_H2O_OHP_He_H, t_co::HeP_OH_OP_He_H, t_co::HeP_SiH_SiP_He_H, t_hmi::heph2heh2p, molecule::hevmol, hextra, hmi, t_hmi::hmicol, t_hmi::hmidep, t_hmi::hmihet, t_hmi::hmin_ct_firstions, t_co::Hminus_C_CH_e, t_co::Hminus_CH2_CH3_e, t_co::Hminus_CH3_CH4_e, t_co::Hminus_CH_CH2_e, t_co::Hminus_H3OP_H2O_H2, t_co::Hminus_H3OP_OH_H2_H, t_co::Hminus_HCOP_CO_H2, t_hmi::HMinus_induc_rec_rate, t_co::Hminus_NH4P_NH3_H2, t_co::Hminus_NP_N_H, t_co::Hminus_O_OH_e, t_co::Hminus_OH_H2O_e, t_hmi::HMinus_photo_rate, t_hmi::hminus_rad_attach, t_hmi::Hmolec, HMRATE, t_co::HP_C2_C2P_H, t_co::HP_C2H2_C2H2P_H, t_co::HP_C2H2_C2HP_H2, t_co::HP_C2H_C2HP_H, t_co::HP_C2H_C2P_H2, t_co::HP_C3_C3P_H, t_co::HP_C3H_C3HP_H, t_co::HP_C3H_C3P_H2, t_co::HP_CH2_CH2P_H, t_co::HP_CH2_CHP_H2, t_co::HP_CH3_CH3P_H, t_co::HP_CH4_CH3P_H2, t_co::HP_CH4_CH4P_H, t_co::HP_CH_CHP_H, t_co::HP_CS_CSP_H, t_co::HP_H2O_H2OP_H, t_co::HP_HCl_HClP_H, t_co::HP_HCN_HCNP_H, t_co::HP_HNC_HCN_HP, t_co::HP_HNO_NOP_H2, t_co::HP_HS_HSP_H, t_co::HP_HS_SP_H2, t_co::HP_NH2_NH2P_H, t_co::HP_NH3_NH3P_H, t_co::HP_NH_NHP_H, t_co::HP_NO_NOP_H, t_co::HP_NS_NSP_H, t_co::HP_O2_O2P_H, t_co::HP_OCS_OCSP_H, t_co::HP_OH_OHP_H, t_co::HP_S2_S2P_H, t_co::HP_SiH_SiP_H2, t_co::HP_SiN_SiNP_H, t_co::HP_SiO_SiOP_H, t_co::HP_SO_SOP_H, t_co::hydro_sink, t_co::hydro_source, t_opac::ih2pnt, t_opac::ih2pof, t_hmi::iheh1, t_hmi::iheh2, INTSZ, ionbal, ioQQQ, ipH1s, t_opac::ipH2_photo_opac_offset, t_opac::ipH2_photo_thresh, ipH2p, ipH2s, ipH_LIKE, ipHELIUM, ipHYDROGEN, ipiv, ipLITHIUM, ipMH, ipMH2g, ipMH2p, ipMH2s, ipMH3p, ipMHeHp, ipMHm, ipMHp, ipOXYGEN, isnan, iso, iteration, t_dynamics::lgAdvection, t_hmi::lgBigH2_evaluated, t_atmdat::lgCTOn, GrainVar::lgDustOn(), GrainVar::lgGrainPhysicsOn, t_hmi::lgH2_Chemistry_BigH2, t_mole::lgH2_grain_deexcitation, t_h2::lgH2ON, t_ionbal::lgHO_ct_chem, t_hmi::lgLeiden_Keep_ipMH2s, t_hmi::lgNoH2Mole, t_ionbal::lgPhotoIoniz_On, t_conv::lgSearch, t_trace::lgTr_H2_Mole, t_trace::lgTrace, t_co::lgUMISTrates, LIMELM, MALLOC, MAX2, MAXREACTANTS, MIN2, mole, t_co::N2_H3P_N2HP_H2, N_H_MOLEC, newreaction(), Hmole_rate_s::next, t_rfield::nflux, Hmole_rate_s::nproducts, NQGRID, Hmole_rate_s::nrates, Hmole_rate_s::nreactants, t_co::nu_CH2_CH_H, t_co::nu_CH2P_CHP_H, t_co::nu_CH3_CH2_H, t_co::nu_CH3_CH_H2, t_co::nu_CH3P_CH2P_H, t_co::nu_CH3P_CHP_H2, t_co::nu_CH4_CH2_H2, t_co::nu_CH4_CH3_H, t_co::nu_CH4_CH_H2, t_co::nu_CH_C_H, t_co::nu_CHP_CP_H, t_co::nu_H2O_OH_H, t_co::nu_OH_O_H, t_co::nu_OHP_O_HP, t_co::nu_SiH_Si_H, t_rfield::nupper, nzone, t_co::O_CH2_CO_H2_1, t_co::O_CH2_CO_H_H_1, t_co::O_CH2P_HCOP_H_1, t_co::O_CH3P_HCOP_H2_1, t_co::O_CH_CO_H_1, t_co::O_CHP_COP_H_1, t_co::O_H2OP_O2P_H2_1, t_co::O_OH_O2_H_1, t_co::O_OHP_O2P_H_1, t_co::O_SiH2P_SiOHP_H_1, t_co::O_SiH_SiO_H_1, OLD_FRAC, t_co::OP_CH_COP_H_1, t_co::OP_OH_O2P_H_1, opac, t_h2::ortho_density, t_rfield::outlin, t_rfield::outlin_noplot, t_h2::para_density, phycon, pow(), POW2, POW3, powi(), Hmole_rate_s::products, qheat(), t_hmi::radasc, t_hmi::rate_grain_h2_J1_to_J0, t_hmi::rate_grain_h2_op_conserve, t_hmi::rate_h2_form_grains_set, GrainVar::rate_h2_form_grains_used_total, Hmole_rate_s::rate_species, Hmole_rate_s::reactants, t_hmi::rel_pop_LTE_H2g, t_hmi::rel_pop_LTE_H2p, t_hmi::rel_pop_LTE_H2s, t_hmi::rel_pop_LTE_Hmin, rfield, t_hmi::rh2dis, t_hmi::rh2h2p, t_hmi::rheph2hpheh, Hmole_rate_s::rk, t_hmi::ScaleJura, SDIV(), secondaries, sexp(), t_co::Si_OH_SiO_H_1, t_mole::sink, t_co::SiP_H2O_SiOHP_H_1, t_co::SiP_OH_SiOP_H_1, SMALLFLOAT, t_mole::source, t_phycon::sqrte, StatesElemNEW, t_hmi::Tad, t_phycon::te, t_phycon::te05, t_phycon::te07, t_phycon::te30, t_phycon::te90, t_phycon::tesqrd, trace, t_hmi::UV_Cont_rel2_Habing_TH85_depth, t_hmi::UV_Cont_rel2_Habing_TH85_face, t_secondaries::x12tot, t_dense::xIonDense, and t_dense::xMolecules.

Referenced by hmole().

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reaction* newreaction ( int  rindex,
int *  in,
int  nin,
int *  out,
int  nout,
int *  rate,
int  nrate 
)

Definition at line 68 of file mole_h_step.cpp.

References ASSERT, Hmole_rate_s::index, MALLOC, MAXPRODUCTS, MAXREACTANTS, and Hmole_rate_s::nrates.

Referenced by hmole_step().

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