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Data Structures | |
| struct | t_h2 |
Defines | |
| #define | N_H2_ELEC 7 |
Functions | |
| void | H2_Create (void) |
| void | H2_ContPoint (void) |
| double | H2_DR (void) |
| void | H2_Init (void) |
| void | H2_init_coreload (void) |
| double | H2_Accel (void) |
| void | H2_RT_OTS (void) |
| double | H2_RadPress (void) |
| void | H2_LinesAdd (void) |
| void | H2_Reset (void) |
| double | H2_InterEnergy (void) |
| void | H2_Colden (const char *chLabel) |
| void | H2_Cooling (const char *chString) |
| void | H2_Punch_line_data (FILE *ioPUN, bool lgDoAll) |
| void | H2_PunchLineStuff (FILE *io, realnum xLimit, long index) |
| void | H2_RT_diffuse (void) |
| void | H2_RTMake (bool lgDoEsc, bool lgUpdateFineOpac) |
| void | H2_RT_tau_inc (void) |
| void | H2_Zero (void) |
| void | H2_Prt_Zone (void) |
| void | H2_LineZero (void) |
| void | H2_RT_tau_reset (void) |
| void | H2_LevelPops (void) |
| void | H2_PunchDo (FILE *io, char chJOB[], const char chTime[], long int ipPun) |
| void | H2_Prt_line_tau (void) |
| void | H2_ParsePunch (char *chCard, char *chHeader) |
| double | H2_itrzn (void) |
| void | H2_Prt_column_density (FILE *ioMEAN) |
Variables | |
| bool | lgH2_READ_DATA |
| EXTERN struct t_h2 | h2 |
| #define N_H2_ELEC 7 |
this is the number of electronic levels
Definition at line 9 of file h2.h.
Referenced by H2_Init(), H2_init_coreload(), H2_ReadDissprob(), H2_ReadEnergies(), H2_ReadTransprob(), H2_Zero(), and ParseAtomH2().
| double H2_Accel | ( | void | ) |
radiative acceleration due to H2 called in rt_line_driving
Definition at line 364 of file mole_h2.cpp.
References ASSERT, DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, and t_h2::nVib_hi.
| void H2_Colden | ( | const char * | chLabel | ) |
H2_Colden maintain H2 column densities within X
| *chLabel |
Definition at line 3603 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2_X_colden, H2_X_colden_LTE, t_h2::Jlowest, t_h2::lgH2ON, t_h2::nRot_hi, and t_h2::nVib_hi.
Referenced by molcol().
| void H2_ContPoint | ( | void | ) |
set the ipCont struc element for the H2 molecule, called by ContCreatePointers
Definition at line 305 of file mole_h2.cpp.
References ASSERT, DEBUG_ENTRY, h2, H2Lines, ipFineCont(), ipLineEnergy(), t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and WAVNRYD.
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| void H2_Cooling | ( | const char * | chString | ) |
H2_cooling evaluate cooling and heating due to H2 molecule, string is name of calling routine
| *chString | name of calling routine |
Definition at line 3051 of file mole_h2.cpp.
References DEBUG_ENTRY, t_hmi::deriv_HeatH2Dexc_BigH2, h2, H2_disske, H2_dissprob, H2_populations, t_hmi::HeatH2Dexc_BigH2, t_hmi::HeatH2Dish_BigH2, hmi, t_h2::Jlowest, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, nCallH2_this_iteration, t_h2::nRot_hi, and t_h2::nVib_hi.
Referenced by CoolEvaluate().
| void H2_Create | ( | void | ) |
create H2 molecules, called by ContCreatePointers
Definition at line 81 of file mole_h2_create.cpp.
References multi_arr< T, d, ALLOC, lgBC >::alloc(), ASSERT, BIGFLOAT, multi_arr< T, d, ALLOC, lgBC >::clone(), CollRateFit, DEBUG_ENTRY, energy_wn, h2, H2_Boltzmann, H2_col_rate_in, H2_col_rate_out, H2_coll_dissoc_rate_coef, H2_coll_dissoc_rate_coef_H2, H2_CollRate, H2_disske, H2_dissprob, H2_ipPhoto, H2_lgOrtho, H2_old_populations, H2_populations, H2_populations_LTE, H2_rad_rate_in, H2_rad_rate_out, H2_stat, H2_X_colden, H2_X_colden_LTE, H2_X_formation, H2_X_Hmin_back, H2_X_rate_from_elec_excited, H2_X_rate_to_elec_excited, ioQQQ, t_h2::Jlowest, lgH2_READ_DATA, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, N_X_COLLIDER, t_h2::nElecLevelOutput, t_mole::nH2_TRACE, t_mole::nH2_trace_full, t_h2::nRot_hi, t_h2::nVib_hi, pops_per_vib, multi_arr< T, d, ALLOC, lgBC >::reserve(), and multi_arr< T, d, ALLOC, lgBC >::zero().
Referenced by ContCreatePointers().
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| double H2_DR | ( | void | ) |
H2_DR choose next zone thickness based on H2 big molecule
Definition at line 3656 of file mole_h2.cpp.
References BIGFLOAT.
| void H2_Init | ( | void | ) |
H2_Init - called by cdInit to init H2
Definition at line 445 of file mole_h2_etc.cpp.
References DEBUG_ENTRY, h2, mole, N_H2_ELEC, t_mole::n_h2_elec_states, and t_h2::nCallH2_this_zone.
Referenced by zero().
| void H2_init_coreload | ( | void | ) |
H2_init_coreload one time initialization
Definition at line 373 of file mole_h2_etc.cpp.
References chH2ColliderLabels, DEBUG_ENTRY, h2, t_h2::Jlowest, N_H2_ELEC, t_h2::nRot_hi, and t_h2::nVib_hi.
Referenced by InitCoreload().
| double H2_InterEnergy | ( | void | ) |
internal energy of H2 called in PresTotCurrent
| double H2_itrzn | ( | void | ) |
H2_itrzn - average number of H2 pop evaluations per zone
Definition at line 292 of file mole_h2.cpp.
References h2, t_h2::lgH2ON, nH2_pops, and nH2_zone.
| void H2_LevelPops | ( | void | ) |
do level populations for H2, called by iso_solve
Definition at line 1420 of file mole_h2.cpp.
References conv, DEBUG_ENTRY, dense, t_dense::eden, fnzone, frac_matrix, t_dense::gas_phase, h2, H2_CollidRateEvalAll(), H2_old_populations, H2_populations, H2_populations_LTE, t_mole::H2_to_H_limit, t_hmi::H2_total, H2_zero_pops_too_low(), hmi, ioQQQ, ipHYDROGEN, t_h2::Jlowest, lgAbort, t_hmi::lgBigH2_evaluated, t_mole::lgH2_LTE, t_h2::lgH2ON, t_conv::lgSearch, mole, mole_H2_LTE(), t_mole::n_h2_elec_states, nCallH2_this_iteration, t_mole::nH2_TRACE, t_mole::nH2_trace_final, t_mole::nH2_trace_full, nLevels_per_elec, t_h2::nRot_hi, t_h2::nVib_hi, nXLevelsMatrix, nzone, t_h2::ortho_density, t_h2::para_density, phycon, pops_per_elec, pops_per_vib, SDIV(), and t_phycon::te.
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| void H2_LinesAdd | ( | void | ) |
add in explicit lines from the large H2 molecule, called by lines_molecules
Definition at line 51 of file mole_h2_io.cpp.
References DEBUG_ENTRY, t_radius::dVeff, h2, H2_SaveLine, H2Lines, t_LineSave::ipass, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, lindst(), LineSave, t_h2::nElecLevelOutput, t_h2::nRot_hi, t_h2::nVib_hi, PutLine(), and radius.
Referenced by lines_molecules().
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| void H2_LineZero | ( | void | ) |
initialize optical depths in H2, called from RT_tau_init
Definition at line 792 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and TransitionZero().
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| void H2_ParsePunch | ( | char * | chCard, | |
| char * | chHeader | |||
| ) |
H2_ParsePunch parse the punch h2 command
Definition at line 160 of file mole_h2_io.cpp.
References cdEXIT, chH2ColliderLabels, chN_X_COLLIDER, t_punch::chPunch, DEBUG_ENTRY, FFmtRead(), h2, INPUT_LINE_LENGTH, ioQQQ, N_X_COLLIDER, t_h2::nElecLevelOutput, nMatch(), t_punch::npunch, t_punch::punarg, punch, and thresh_punline_h2.
Referenced by ParsePunch().
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| void H2_Prt_column_density | ( | FILE * | ioMEAN | ) |
H2_Prt_column_density print H2 info into zone results, called from prtzone for each printed zone
| *ioMEAN | this is stream used for io, is stdout when called by final, is punch unit when punch output generated |
Definition at line 452 of file mole_h2_io.cpp.
References colden, t_colden::colden, DEBUG_ENTRY, h2, t_hmi::H2_total, H2_X_colden, hmi, ipCOL_H2g, ipCOL_H2s, t_h2::lgH2ON, t_h2::nCallH2_this_zone, t_h2::ortho_colden, t_h2::para_colden, pops_per_vib, PrintEfmt(), and SDIV().
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| void H2_Prt_line_tau | ( | void | ) |
print line optical depths, called from premet in response to print line optical depths command
Definition at line 1193 of file mole_h2_io.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and prme().
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| void H2_Prt_Zone | ( | void | ) |
H2_Prt_Zone print H2 info into zone results, called from prtzone for each printed zone
Definition at line 418 of file mole_h2_io.cpp.
References DEBUG_ENTRY, h2, H2_populations, t_hmi::H2_total, hmi, ioQQQ, t_h2::lgH2ON, t_h2::nCallH2_this_zone, t_h2::ortho_density, t_h2::para_density, pops_per_vib, PrintEfmt(), and SDIV().
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| void H2_Punch_line_data | ( | FILE * | ioPUN, | |
| bool | lgDoAll | |||
| ) |
punch H2 line data
| ioPUN | io unit for punch | |
| lgDoAll | punch all levels if true, only subset if false |
Definition at line 1069 of file mole_h2_io.cpp.
References cdEXIT, DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and Punch1LineData().
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| void H2_PunchDo | ( | FILE * | io, | |
| char | chJOB[], | |||
| const char | chTime[], | |||
| long int | ipPun | |||
| ) |
punch some properties of the large H2 molecule
| io | ||
| chJOB[] | ||
| chTime[] | ||
| ipPun |
Definition at line 1263 of file mole_h2_io.cpp.
References chlgPara, DEBUG_ENTRY, energy_wn, h2, H2_col_rate_in, H2_col_rate_out, H2_lgOrtho, H2_old_populations, H2_populations, H2_populations_LTE, H2_rad_rate_in, H2_rad_rate_out, H2_stat, t_hmi::H2_total, hmi, t_h2::Jlowest, t_hmi::lgBigH2_evaluated, t_h2::lgH2ON, t_h2::nRot_hi, t_h2::nVib_hi, t_h2::ortho_density, t_h2::para_density, t_punch::punarg, punch, and SDIV().
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| void H2_PunchLineStuff | ( | FILE * | io, | |
| realnum | xLimit, | |||
| long | index | |||
| ) |
include H2 lines in punched optical depths, etc, called from PunchLineStuff
| io | ||
| xLimit | ||
| index |
Definition at line 1140 of file mole_h2_io.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and pun1Line().
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| double H2_RadPress | ( | void | ) |
rad pre due to h2 lines called in PresTotCurrent
Definition at line 427 of file mole_h2.cpp.
References ASSERT, DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nCallH2_this_zone, t_h2::nRot_hi, t_h2::nVib_hi, PressureRadiationLine(), and SMALLFLOAT.
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| void H2_Reset | ( | void | ) |
H2_Reset called to reset variables that are needed after an iteration
Definition at line 460 of file mole_h2_etc.cpp.
References DEBUG_ENTRY, fnzone, h2, H2_SaveLine, ioQQQ, iteration, iterationAsEval, mole, nCallH2_this_iteration, nH2_pops, t_mole::nH2_TRACE, nH2_zone, nzone_nlevel_set, nzoneAsEval, t_h2::renorm_max, and t_h2::renorm_min.
Referenced by IterRestart().
| void H2_RT_diffuse | ( | void | ) |
do emission from H2 - called from RT_diffuse
Definition at line 566 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, t_h2::nCallH2_this_zone, t_h2::nRot_hi, t_h2::nVib_hi, and outline().
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| void H2_RT_OTS | ( | void | ) |
H2_RT_OTS - add H2 ots fields
Definition at line 3662 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, t_h2::nCallH2_this_zone, t_h2::nRot_hi, t_h2::nVib_hi, and RT_OTS_AddLine().
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| void H2_RT_tau_inc | ( | void | ) |
increment optical depth for the H2 molecule, called from RT_tau_inc
Definition at line 724 of file mole_h2.cpp.
References ASSERT, DEBUG_ENTRY, h2, H2_renorm_chemistry, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, MAX2, MIN2, mole, t_mole::n_h2_elec_states, nCallH2_this_iteration, t_h2::nRot_hi, t_h2::nVib_hi, nzone, t_h2::renorm_max, t_h2::renorm_min, and RT_line_one_tauinc().
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| void H2_RT_tau_reset | ( | void | ) |
the large H2 molecule, called from RT_tau_reset
Definition at line 847 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and RT_line_one_tau_reset().
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| void H2_RTMake | ( | bool | lgDoEsc, | |
| bool | lgUpdateFineOpac | |||
| ) |
do RT for H2 - called from RT_line_all
| lgDoEsc | ||
| lgUpdateFineOpac |
Definition at line 619 of file mole_h2.cpp.
References DEBUG_ENTRY, h2, H2Lines, t_h2::Jlowest, lgH2_line_exists, t_h2::lgH2ON, mole, t_mole::n_h2_elec_states, t_h2::nRot_hi, t_h2::nVib_hi, and RT_line_one().
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| void H2_Zero | ( | void | ) |
zero out vars in the large H2 molecule, called from zero
Definition at line 499 of file mole_h2_etc.cpp.
References DEBUG_ENTRY, h2, t_hmi::H2_H2g_to_H2s_rate_BigH2, t_hmi::H2_photodissoc_BigH2_H2g, t_hmi::H2_photodissoc_BigH2_H2s, t_hmi::H2_Solomon_dissoc_rate_BigH2_H2g, t_hmi::H2_Solomon_dissoc_rate_BigH2_H2s, t_mole::H2_to_H_limit, t_hmi::HeatH2Dexc_BigH2, hmi, iterationAsEval, t_hmi::lgBigH2_evaluated, t_hmi::lgH2_Chemistry_BigH2, t_mole::lgH2_LTE, lgH2_READ_DATA, t_hmi::lgH2_Thermal_BigH2, t_h2::lgH2ON, mole, N_H2_ELEC, t_mole::n_h2_elec_states, nCallH2_this_iteration, nH2_pops, nH2_zone, nXLevelsMatrix, nzone_nlevel_set, nzoneAsEval, t_h2::ortho_density, t_h2::para_density, t_h2::renorm_max, and t_h2::renorm_min.
Referenced by atmol_popsolve(), Bruggeman(), cdH2_colden(), ConvTempEdenIoniz(), CoolCarb(), CoolEvaluate(), CoolOxyg(), H2_Accel(), H2_Colden(), H2_CollidRateEvalOne(), H2_CollidRateRead(), H2_ContPoint(), H2_Cooling(), H2_Create(), H2_gs_rates(), H2_Init(), H2_init_coreload(), H2_itrzn(), H2_LevelPops(), H2_LinesAdd(), H2_LineZero(), H2_ParsePunch(), H2_Prt_column_density(), H2_Prt_line_tau(), H2_Prt_Zone(), H2_Punch_line_data(), H2_PunchDo(), H2_PunchLineStuff(), H2_RadPress(), H2_Read_hminus_distribution(), H2_ReadDissprob(), H2_ReadEnergies(), H2_ReadTransprob(), H2_Reset(), H2_RT_diffuse(), H2_RT_OTS(), H2_RT_tau_inc(), H2_RT_tau_reset(), H2_RTMake(), H2_Solomon_rate(), H2_X_coll_rate_evaluate(), H2_Zero(), H2_zero_pops_too_low(), hmole_reactions(), InitDefaultsPreparse(), IterRestart(), lgCheckAsserts(), lines_molecules(), mole_H2_form(), mole_H2_LTE(), ParseAtomH2(), ParsePrint(), ParseSet(), punch_line(), PunchSpecial(), and Stognienko().
| bool lgH2_READ_DATA |
flag saying whether molecular data have been read in yet
Definition at line 59 of file cdinit.cpp.
Referenced by H2_Create(), H2_Zero(), and ParseAtomH2().
1.4.7